Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
R
reproductionTool
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Package registry
Model registry
Operate
Environments
Terraform modules
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
SMAC
Reproductibilité des recherches dans SMAC
reproductionTool
Commits
ad1490f1
Commit
ad1490f1
authored
3 years ago
by
AxelCarayon
Browse files
Options
Downloads
Patches
Plain Diff
resolution bug chemin lors de la reproduction
parent
ecf9173c
No related branches found
No related tags found
1 merge request
!20
Amelioration execution
Changes
2
Hide whitespace changes
Inline
Side-by-side
Showing
2 changed files
loadExperiment.py
+22
-5
22 additions, 5 deletions
loadExperiment.py
registerExperiment.py
+3
-7
3 additions, 7 deletions
registerExperiment.py
with
25 additions
and
12 deletions
loadExperiment.py
+
22
−
5
View file @
ad1490f1
...
...
@@ -12,8 +12,10 @@ repo = None
folder
=
None
commandsFile
=
None
instructionFile
=
None
inputFiles
=
[]
outputFiles
=
[]
beforeHash
=
None
...
...
@@ -37,7 +39,7 @@ def init(repository,branch) -> None :
os
.
chdir
(
folder
)
def
getParameters
()
->
None
:
global
commandsFile
,
inputFiles
,
outputFiles
,
beforeHash
global
commandsFile
,
inputFiles
,
outputFiles
,
beforeHash
,
instructionFile
if
not
(
os
.
path
.
exists
(
'
experimentResume.yaml
'
)):
raise
Exception
(
"
No exeperimentResume.yaml file found, the branch is not an exeperiment
"
)
with
open
(
'
experimentResume.yaml
'
,
'
r
'
)
as
stream
:
...
...
@@ -46,6 +48,7 @@ def getParameters() -> None :
outputFiles
=
parameters
.
get
(
'
outputs
'
)
inputFiles
=
parameters
.
get
(
'
inputs
'
)
beforeHash
=
parameters
.
get
(
'
checksums
'
)
instructionFile
=
parameters
.
get
(
'
instructions
'
)
def
runExperiment
()
->
None
:
...
...
@@ -56,6 +59,15 @@ def runExperiment() -> None :
process
.
check_returncode
()
print
(
"
done
"
)
def
checkForInstructions
()
->
None
:
if
(
instructionFile
!=
None
)
:
print
(
"
You can check the instructions for the experiment in the file :
"
+
instructionFile
)
else
:
warnings
.
warn
(
"
No instructions for the experiment found in the repository
"
)
print
(
"
Run the exepriment and then press enter when it
'
s done
"
)
done
=
"
nope
"
while
(
done
!=
""
)
:
done
=
input
()
def
genChecksum
(
file
)
->
str
:
hash_md5
=
hashlib
.
md5
()
...
...
@@ -68,7 +80,7 @@ def genChecksums() -> list[dict]:
checksums
=
[]
for
file
in
os
.
listdir
(
OUTPUT_FOLDER
)
:
if
not
file
.
endswith
(
"
.gitkeep
"
):
checksums
.
append
({
file
:
genChecksum
(
f
'
outputs
/
{
file
}
'
)})
checksums
.
append
({
f
"
{
OUTPUT_FOLDER
}
/
{
file
}
"
:
genChecksum
(
f
'
{
OUTPUT_FOLDER
}
/
{
file
}
'
)})
return
checksums
...
...
@@ -77,7 +89,7 @@ def compareChecksums() -> bool:
for
(
dict1
,
dict2
)
in
zip
(
beforeHash
,
genChecksums
()):
for
(
key
,
value
)
in
dict1
.
items
():
if
dict2
.
get
(
key
)
!=
value
:
warnings
.
warn
(
f
"
{
OUTPUT_FOLDER
}
/
{
key
}
has changed
"
)
warnings
.
warn
(
f
"
{
key
}
has changed
"
)
changes
=
True
return
changes
...
...
@@ -88,9 +100,14 @@ def run(repository, branch) -> None :
print
(
"
Getting the experiment parameters ...
"
)
getParameters
()
print
(
"
Running the experiment ...
"
)
runExperiment
()
if
(
commandsFile
!=
None
)
:
runExperiment
()
else
:
checkForInstructions
()
print
(
"
Comparing checksums of the outputs ...
"
)
if
(
compareChecksums
())
:
print
(
"
The exepriment was reproduced with succes but some output files are differents.
"
)
else
:
print
(
"
The exepriment was reproduced with succes !
"
)
\ No newline at end of file
print
(
"
The exepriment was reproduced with succes !
"
)
#TODO : sur la mainExperiment15, on a du changement quand on reproduit l'expérience ...
\ No newline at end of file
This diff is collapsed.
Click to expand it.
registerExperiment.py
+
3
−
7
View file @
ad1490f1
...
...
@@ -188,19 +188,15 @@ def writeInYaml() -> None:
with
open
(
'
experimentResume.yaml
'
,
'
w
'
)
as
yamlFile
:
yaml
.
safe_dump
(
cur_yaml
,
yamlFile
)
def
successfullyCreatedNewBranch
(
name
)
->
bool
:
try
:
repository
.
git
.
checkout
(
'
-b
'
,
name
)
return
True
except
Exception
as
e
:
return
False
def
pushBranch
(
version
=
1
)
->
None
:
print
(
"
Pushing branch...
"
)
while
not
(
successfullyCreatedNewBranch
(
f
"
{
experimentName
}
Experiment
{
version
}
"
)):
while
f
"
{
experimentName
}
Experiment
{
version
}
"
in
repository
.
remote
().
refs
:
print
(
f
"
{
experimentName
}
Experiment
{
version
}
already exists
"
)
version
+=
1
newTag
=
f
"
{
currentTag
}
-e
{
version
}
"
print
(
f
"
creating
{
experimentName
}
Experiment
{
version
}
branch and pushing changes to it ...
"
)
repository
.
git
.
checkout
(
b
=
f
"
{
experimentName
}
Experiment
{
version
}
"
)
repository
.
git
.
add
(
all
=
True
)
repository
.
git
.
commit
(
m
=
f
"
{
experimentName
}
Experiment
{
version
}
"
)
repository
.
git
.
push
(
'
--set-upstream
'
,
repository
.
remote
().
name
,
f
"
{
experimentName
}
Experiment
{
version
}
"
)
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment